Logo
full name
high mobility group box 1

synonyms
HMG1, HMG3, SBP-1, HMGB1, ENSG00000189403

HGNC
HGNC:4983

Entrez Gene
Gene:3146

ENSEMBL
ENSG00000189403

location
chr: 13
start: 31032877
stop: 31191942
strand: -

transcripts
ENST00000341423.5

pathways
Activated TLR4 signalling [NCBI:1269236] [REACTOME:R-HSA-166054] [PUBMED:15276183] [PUBMED:15588429] [PUBMED:15845500] [PUBMED:15596121]
Activation of DNA fragmentation factor [NCBI:1270293] [REACTOME:R-HSA-211227] [PUBMED:9422506] [PUBMED:12748178] [PUBMED:10318789] [PUBMED:10713148] [PUBMED:15723341]
Advanced glycosylation endproduct receptor signaling [NCBI:1269258] [REACTOME:R-HSA-879415] [PUBMED:16133426]
Apoptosis [NCBI:83060] [KEGG:hsa04210] [NCBI:1270262] [REACTOME:R-HSA-109581] [PUBMED:12189384] [PUBMED:20533903] [PUBMED:18208375] [PUBMED:22429822] [PUBMED:15218528] [PUBMED:24769728] [PUBMED:18023214] [PUBMED:25526085] [PUBMED:23070002] [PUBMED:15654015] [PUBMED:15601572] [PUBMED:14561771] [PUBMED:24278747] [PUBMED:21914490] [PUBMED:22465226] [PUBMED:21145844] [PUBMED:12838338] [PUBMED:18238895] [PUBMED:12949498] [PUBMED:18304445] [PUBMED:14737178] [PUBMED:26231733] [PUBMED:9916983] [PUBMED:14634621] [PUBMED:19770840] [PUBMED:22075987] [PUBMED:4561027] [PUBMED:20075940] [PUBMED:9894605] [PUBMED:26615431] [PUBMED:12505355] [PUBMED:11520933] [PUBMED:19148180] [PUBMED:16397578] [PUBMED:15719025] [PUBMED:15322527] [PUBMED:15725726] [PUBMED:12209154] [PUBMED:23803157]
Apoptosis induced DNA fragmentation [NCBI:1270292] [REACTOME:R-HSA-140342] [PUBMED:15723341]
Apoptotic execution phase [NCBI:1270287] [REACTOME:R-HSA-75153] [PUBMED:12655297]
Autophagy - animal [NCBI:83058] [KEGG:hsa04140] [PUBMED:16200202] [PUBMED:15325588] [PUBMED:24343578] [PUBMED:15978794] [PUBMED:19802558] [PUBMED:16099218] [PUBMED:11099404] [PUBMED:19653858] [PUBMED:15325584] [PUBMED:20034776] [PUBMED:15928708] [PUBMED:21801009] [PUBMED:25948417] [PUBMED:16125113] [PUBMED:21187343]
Base excision repair [NCBI:83043] [KEGG:hsa03410] [PUBMED:17893748] [PUBMED:11436317] [PUBMED:17337257] [PUBMED:21665970]
Cytosolic sensors of pathogen-associated DNA [NCBI:1269268] [REACTOME:R-HSA-1834949] [PUBMED:23706668] [PUBMED:21533068] [PUBMED:23706667]
DEx/H-box helicases activate type I IFN and inflammatory cytokines production [NCBI:1269276] [REACTOME:R-HSA-3134963] [PUBMED:20696886]
Immune System [NCBI:1269170] [REACTOME:R-HSA-168256]
Innate Immune System [NCBI:1269203] [REACTOME:R-HSA-168249]
MyD88 cascade initiated on plasma membrane [NCBI:1269207] [REACTOME:R-HSA-975871] [PUBMED:15728506] [PUBMED:16239509]
MyD88 dependent cascade initiated on endosome [NCBI:1269228] [REACTOME:R-HSA-975155] [PUBMED:20237413] [PUBMED:15276183] [PUBMED:18652679]
MyD88-independent TLR3/TLR4 cascade [NCBI:1269220] [REACTOME:R-HSA-166166] [PUBMED:15276183]
MyD88:Mal cascade initiated on plasma membrane [NCBI:1269237] [REACTOME:R-HSA-166058] [PUBMED:15276183]
Neutrophil degranulation [NCBI:1457780] [REACTOME:R-HSA-6798695] [PUBMED:20338884] [PUBMED:1378856] [PUBMED:17627888] [PUBMED:23650620] [PUBMED:8692836]
Programmed Cell Death [NCBI:1270261] [REACTOME:R-HSA-5357801] [PUBMED:25236395]
RIG-I/MDA5 mediated induction of IFN-alpha/beta pathways [NCBI:1269259] [REACTOME:R-HSA-168928] [PUBMED:17395582] [PUBMED:17942531] [PUBMED:18701081] [PUBMED:17683970] [PUBMED:18989317] [PUBMED:16214811]
RIP-mediated NFkB activation via ZBP1 [NCBI:1269271] [REACTOME:R-HSA-1810476] [PUBMED:18941233] [PUBMED:19590578]
Regulation of TLR by endogenous ligand [NCBI:1427857] [REACTOME:R-HSA-5686938] [PUBMED:25391648] [PUBMED:20706656] [PUBMED:20629986] [PUBMED:20179153]
TAK1 activates NFkB by phosphorylation and activation of IKKs complex [NCBI:1269210] [REACTOME:R-HSA-445989] [PUBMED:15837794] [PUBMED:11460167]
TRAF6 mediated NF-kB activation [NCBI:1269263] [REACTOME:R-HSA-933542] [PUBMED:18984593]
TRAF6 mediated induction of NFkB and MAP kinases upon TLR7/8 or 9 activation [NCBI:1269229] [REACTOME:R-HSA-975138] [PUBMED:22511786] [PUBMED:18794297]
TRIF-mediated TLR3/TLR4 signaling [NCBI:1269221] [REACTOME:R-HSA-937061] [PUBMED:15814722] [PUBMED:12855817] [PUBMED:14739303]
Toll Like Receptor 10 (TLR10) Cascade [NCBI:1269206] [REACTOME:R-HSA-168142] [PUBMED:15728506] [PUBMED:18332149]
Toll Like Receptor 2 (TLR2) Cascade [NCBI:1269238] [REACTOME:R-HSA-181438] [PUBMED:10820283]
Toll Like Receptor 3 (TLR3) Cascade [NCBI:1269219] [REACTOME:R-HSA-168164] [PUBMED:19627256] [PUBMED:15733829] [PUBMED:18202435]
Toll Like Receptor 4 (TLR4) Cascade [NCBI:1269234] [REACTOME:R-HSA-166016]
Toll Like Receptor 5 (TLR5) Cascade [NCBI:1269226] [REACTOME:R-HSA-168176] [PUBMED:11489966] [PUBMED:11323673]
Toll Like Receptor 7/8 (TLR7/8) Cascade [NCBI:1269227] [REACTOME:R-HSA-168181] [PUBMED:14976262]
Toll Like Receptor 9 (TLR9) Cascade [NCBI:1269233] [REACTOME:R-HSA-168138] [PUBMED:14751759]
Toll Like Receptor TLR1:TLR2 Cascade [NCBI:1269239] [REACTOME:R-HSA-168179] [PUBMED:12975352]
Toll Like Receptor TLR6:TLR2 Cascade [NCBI:1269240] [REACTOME:R-HSA-168188] [PUBMED:14977973]
Toll-Like Receptors Cascades [NCBI:1269204] [REACTOME:R-HSA-168898] [PUBMED:15950447] [PUBMED:12893815] [PUBMED:15976490] [PUBMED:15585605] [PUBMED:14751757]
ZBP1(DAI) mediated induction of type I IFNs [NCBI:1269269] [REACTOME:R-HSA-1606322] [PUBMED:18375758] [PUBMED:18941233] [PUBMED:11842111] [PUBMED:19590578] [PUBMED:17618271] [PUBMED:18771559] [PUBMED:19846511]
amb2 Integrin signaling [NCBI:137945] [Pathway Interaction Database:amb2_neutrophils_pathway] [PUBMED:15004192] [PUBMED:16260637] [PUBMED:8874219] [PUBMED:12736251] [PUBMED:12824186] [PUBMED:17202407] [PUBMED:15458976] [PUBMED:12208882] [PUBMED:10985384] [PUBMED:8598477] [PUBMED:8157977] [PUBMED:14530377] [PUBMED:16567504] [PUBMED:7836767] [PUBMED:17003381] [PUBMED:10899906] [PUBMED:15741160] [PUBMED:9920836] [PUBMED:12941957] [PUBMED:12773513] [PUBMED:15283855] [PUBMED:16854414] [PUBMED:15217824] [PUBMED:15090462] [PUBMED:14769799] [PUBMED:16905120] [PUBMED:9831565] [PUBMED:12194823] [PUBMED:17268551] [PUBMED:17133598] [PUBMED:15153528] [PUBMED:11418469] [PUBMED:14623906] [PUBMED:12036876] [PUBMED:16391519] [PUBMED:15304494] [PUBMED:16093349] [PUBMED:16403785]